Open Science

Open Science and Reproducibility

Go to [presentation.](https://lunasare.github.io/slides/reproducibility-2020-04-15)

Open Science and Reproducibility

Go to [presentation.](https://lunasare.github.io/slides/reproducibility-2020-04-15)

Create a website using blogdown!

Go to [tutorial.](https://lunasare.github.io/slides/tutorial-blogdown-2020-03-24)

Open Tree of Life curation tools

Useful links OpenTree curation drive folder https://drive.google.com/drive/folders/1q3Eddo23FwZewL2sgp8Uhwp12fZl0V1k

Tips for writing coding tutorials (hacks for hacking)

Go to [tutorial.](https://lunasare.github.io/slides/tutorial-blogdown-2020-03-24)

Datelife

An overview of the current state of the [Datelife](http://datelife.org/) project.

iNaturalist phylogenies

Getting chronograms and geographic distribution maps for species in iNaturalist projects.

Phylotastic

Getting phylogenetic trees on the fly for education and outreach. An overview of the [Phylotastic](http://datelife.org/) project.

DateLife, leveraging databases and analytical tools to reveal the dated Tree of Life

In this paper we present datelife, a service implemented via an R package and a web site (http://www.datelife.org/) for efficient reuse, summary and reanalysis of published data on lineage divergence times.

Phylotastic, improving access to tree-of-life knowledge with flexible, on-the-fly delivery of trees

Phylogenetic knowledge is of great importance for research and education. Yet, it remians mostly unavailable for the non-specialist and the general public. In this paper, we report a publicly accessible system for on-the-fly delivery of phylogenetic knowledge that consists of a web portal that implements 3 types of workflows to obtain species phylogenies (scaled by geologic time and decorated with thumbnail images); 19 underlying web services accessible via a common registry; and toolbox code in R and Python so that others can create applications that leverage these services.